Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015893824.1_cds_XP_016447447.1_42207
CDS Infomation

[gene=LOC107772456] [db_xref=GeneID:107772456] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016447447.1] [location=join(30040..30238,30323..31140,31303..31452,34478..34542,34610..34826)] [gbkey=CDS]
Sequence

ATGGTTCTTGTTTTGCGTTATGTTGATAAAAATGGTGAAGTGGTAGAGCGATTTGTTGGT
CTTGTCCATGTTAGTGATACATTGGCATTCTCATTAAAGGAAGCAATCTATTCTTTGCTT
TTGGACCACTTACTAAGTCCGTCTCAAATACGTGGACAAGGTTATGATGGAGCTACTAAC
ATGAGGAGAGAGATAAGTGCTATGTCAAAAAAGTATTTGGATGTCGAAGACTTCTTTTGC
CATGTTACTAATGTGTTCAATGTCATTGGAGTATCTTTTAAGCGAAGAGATTTGCTTCGC
CATCTTCAAGCTGAAAAACTGGAGCAATTACTTGAGTCCGGTGAAATTCATACCGGGCAA
GGACTAAATCAAGAACGCGGGCTTCAAAGACCAGGTGATACTCGTTGGGGATCACATTTC
AAAATATTAGATAACTTTATTGTTATTTTCTCATCTATTATTCGTGTGCTTGAAGTGATT
GAACATGAAGGTTCTACCTCAAATGAGAGACATCAAGCAAAATATCTTTTGAGTGAGATA
ATAACATTCAAATTTGTTTTTATGCTTCAATTGATGTTGAAAGTTTTGGTAATGTCAAAT
GAGTTGAACAAGATCCTACAAAAGAGAGATCAAGATATTGTTAATGCCGTGGAGTTTCTT
TATATTACAAACAAAAGATTGCAAGATATGAGGGAAACTGGATGGGAATCTTTGCTAGAT
TATGTTTCCTCATTTTGTCATATGCATGATACTATGATTCCCAAGATGGATGAATCTTAT
TTTCTTGAAAAGTCGAAGCGCAAGTCTTCTGGTATTTGTTATTCACACCACTTGCGTGTT
GATATCTTTTATGCTGTAATTGATGTGCAACTTCAAGAGCTTAATGACCGTTTTGATGTA
GTGAGTAGCGATTTGCTTCTTGGGATGGCTAGTTTGAATCCAGTCAATTCTTTTGCTAAT
TTTGATAAAGGTAGAATAATGACTTTAGCAAAATATTACCCAAATGAGTTTGATGAATTA
ACTCTGATTTTACCTATTGCTACCGCAACTATGGAGAGAGCATTCTCATCCATGAAGCAG
ATAAAGAATGAAGAGAGGAACATCATGGGTGATCAATATTTAAATGATTGTTTAGTTTGT
TACATAGAGCGTGATGTATTTACAAATGGGTTTCGCACCTGCAGAAAGTGCAACGCACCT
ACGGCTTTCGCACCTGCGGAAAAGCCTCGCAGGTGCGCCCGAGATTCCCCACCTGCGATG
GCATGCCTCCCTTCCCTCTTCGCTTATGCGAATAAATCTCGCATCTGCGAGTGTCTCTCC
TGCGAGCTTCTGCCGCACCTGCGGATGTCGCACATGCGGCTTGCCAAGCGCAGGTGCAAT
TCTGACAGTAACTGGGAGCTTCAGTTCTGGCTCCCAATTTCCAACTTGGTTCGAGCCTCG
TCCGATTAA

Peptide Sequence

PEP ID

XP_016447447.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MVLVLRYVDKNGEVVERFVGLVHVSDTLAFSLKEAIYSLLLDHLLSPSQIRGQGYDGATN
MRREISAMSKKYLDVEDFFCHVTNVFNVIGVSFKRRDLLRHLQAEKLEQLLESGEIHTGQ
GLNQERGLQRPGDTRWGSHFKILDNFIVIFSSIIRVLEVIEHEGSTSNERHQAKYLLSEI
ITFKFVFMLQLMLKVLVMSNELNKILQKRDQDIVNAVEFLYITNKRLQDMRETGWESLLD
YVSSFCHMHDTMIPKMDESYFLEKSKRKSSGICYSHHLRVDIFYAVIDVQLQELNDRFDV
VSSDLLLGMASLNPVNSFANFDKGRIMTLAKYYPNEFDELTLILPIATATMERAFSSMKQ
IKNEERNIMGDQYLNDCLVCYIERDVFTNGFRTCRKCNAPTAFAPAEKPRRCARDSPPAM
ACLPSLFAYANKSRICECLSCELLPHLRMSHMRLAKRRCNSDSNWELQFWLPISNLVRAS
SD

Transcript Sequence

Gene sequence data has not been registered.